SrasV1, Main, Exploration, bibRecord, 004629

Severe acute respiratory syndrome coronavirus-like virus in Chinese horseshoe bats

Identifieur interne : 004629 ( Main/Exploration ); précédent : 004628; suivant : 004630

Severe acute respiratory syndrome coronavirus-like virus in Chinese horseshoe bats

Auteurs : Susanna K. P. Lau ; Patrick C. Y. Woo ; Kenneth S. M. Li ; Yi Huang ; Hoi-Wah Tsoi ; Beatrice H. L. Wong ; Samson S. Y. Wong ; Suet-Yi Leung [République populaire de Chine] ; Kwok-Hung Chan ; Kwok-Yung Yuen

Source :

Proceedings of the National Academy of Sciences of the United States of America [ 0027-8424 ] ; 2005.

RBID : PMC:1236580

Descripteurs français

KwdFr :
- Analyse de séquence d'ADN, Animaux, Chiroptera (virologie), Données de séquences moléculaires, Génome viral, Hong Kong, Phylogénie, Protéines virales (génétique), Protéines virales (sang), Séquence d'acides aminés, Séquence nucléotidique, Virus du SRAS (), Virus du SRAS (génétique), Virus du SRAS (isolement et purification).
MESH :
- génétique : Protéines virales, Virus du SRAS.
- isolement et purification : Virus du SRAS.
- sang : Protéines virales.
- virologie : Chiroptera.
- Analyse de séquence d'ADN, Animaux, Données de séquences moléculaires, Génome viral, Hong Kong, Phylogénie, Séquence d'acides aminés, Séquence nucléotidique, Virus du SRAS.
Wicri :
- geographic : Hong Kong.

English descriptors

KwdEn :
- Amino Acid Sequence, Animals, Base Sequence, Chiroptera (virology), Genome, Viral, Hong Kong, Molecular Sequence Data, Phylogeny, SARS Virus (classification), SARS Virus (genetics), SARS Virus (isolation & purification), Sequence Analysis, DNA, Viral Proteins (blood), Viral Proteins (genetics).
MESH :
- chemical , blood : Viral Proteins.
- chemical , genetics : Viral Proteins.
- geographic : Hong Kong.
- classification : SARS Virus.
- genetics : SARS Virus.
- isolation & purification : SARS Virus.
- virology : Chiroptera.
- Amino Acid Sequence, Animals, Base Sequence, Genome, Viral, Molecular Sequence Data, Phylogeny, Sequence Analysis, DNA.

Abstract

Although the finding of severe acute respiratory syndrome coronavirus (SARS-CoV) in caged palm civets from live animal markets in China has provided evidence for interspecies transmission in the genesis of the SARS epidemic, subsequent studies suggested that the civet may have served only as an amplification host for SARS-CoV. In a surveillance study for CoV in noncaged animals from the wild areas of the Hong Kong Special Administration Region, we identified a CoV closely related to SARS-CoV (bat-SARS-CoV) from 23 (39%) of 59 anal swabs of wild Chinese horseshoe bats (Rhinolophus sinicus) by using RT-PCR. Sequencing and analysis of three bat-SARS-CoV genomes from samples collected at different dates showed that bat-SARS-CoV is closely related to SARS-CoV from humans and civets. Phylogenetic analysis showed that bat-SARS-CoV formed a distinct cluster with SARS-CoV as group 2b CoV, distantly related to known group 2 CoV. Most differences between the bat-SARS-CoV and SARS-CoV genomes were observed in the spike genes, ORF 3 and ORF 8, which are the regions where most variations also were observed between human and civet SARS-CoV genomes. In addition, the presence of a 29-bp insertion in ORF 8 of bat-SARS-CoV genome, not in most human SARS-CoV genomes, suggests that it has a common ancestor with civet SARS-CoV. Antibody against recombinant bat-SARS-CoV nucleocapsid protein was detected in 84% of Chinese horseshoe bats by using an enzyme immunoassay. Neutralizing antibody to human SARS-CoV also was detected in bats with lower viral loads. Precautions should be exercised in the handling of these animals.

Url:

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1236580

DOI: 10.1073/pnas.0506735102
PubMed: 16169905
PubMed Central: 1236580

Affiliations:

République populaire de Chine

Le document en format XML

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<author><name sortKey="Lau, Susanna K P" sort="Lau, Susanna K P" uniqKey="Lau S" first="Susanna K. P." last="Lau">Susanna K. P. Lau</name>
<affiliation><nlm:aff id="N0x9b35768.0x9ac1b40">Department of Microbiology,</nlm:aff>
</affiliation>
<affiliation><nlm:aff id="N0x9b35768.0x9ac1b40">Research Centre of Infection and Immunology,</nlm:aff>
</affiliation>
<affiliation><nlm:aff wicri:cut=", and" id="N0x9b35768.0x9ac1b40">State Key Laboratory of Emerging Infectious Diseases</nlm:aff>
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<author><name sortKey="Woo, Patrick C Y" sort="Woo, Patrick C Y" uniqKey="Woo P" first="Patrick C. Y." last="Woo">Patrick C. Y. Woo</name>
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<author><name sortKey="Li, Kenneth S M" sort="Li, Kenneth S M" uniqKey="Li K" first="Kenneth S. M." last="Li">Kenneth S. M. Li</name>
<affiliation><nlm:aff id="N0x9b35768.0x9ac1b40">Department of Microbiology,</nlm:aff>
</affiliation>
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<author><name sortKey="Huang, Yi" sort="Huang, Yi" uniqKey="Huang Y" first="Yi" last="Huang">Yi Huang</name>
<affiliation><nlm:aff id="N0x9b35768.0x9ac1b40">Department of Microbiology,</nlm:aff>
</affiliation>
</author>
<author><name sortKey="Tsoi, Hoi Wah" sort="Tsoi, Hoi Wah" uniqKey="Tsoi H" first="Hoi-Wah" last="Tsoi">Hoi-Wah Tsoi</name>
<affiliation><nlm:aff id="N0x9b35768.0x9ac1b40">Department of Microbiology,</nlm:aff>
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<author><name sortKey="Wong, Beatrice H L" sort="Wong, Beatrice H L" uniqKey="Wong B" first="Beatrice H. L." last="Wong">Beatrice H. L. Wong</name>
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<author><name sortKey="Chan, Kwok Hung" sort="Chan, Kwok Hung" uniqKey="Chan K" first="Kwok-Hung" last="Chan">Kwok-Hung Chan</name>
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<author><name sortKey="Yuen, Kwok Yung" sort="Yuen, Kwok Yung" uniqKey="Yuen K" first="Kwok-Yung" last="Yuen">Kwok-Yung Yuen</name>
<affiliation><nlm:aff id="N0x9b35768.0x9ac1b40">Department of Microbiology,</nlm:aff>
</affiliation>
<affiliation><nlm:aff id="N0x9b35768.0x9ac1b40">Research Centre of Infection and Immunology,</nlm:aff>
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<sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Severe acute respiratory syndrome coronavirus-like virus in Chinese horseshoe bats</title>
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<author><name sortKey="Tsoi, Hoi Wah" sort="Tsoi, Hoi Wah" uniqKey="Tsoi H" first="Hoi-Wah" last="Tsoi">Hoi-Wah Tsoi</name>
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</affiliation>
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<author><name sortKey="Wong, Beatrice H L" sort="Wong, Beatrice H L" uniqKey="Wong B" first="Beatrice H. L." last="Wong">Beatrice H. L. Wong</name>
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<author><name sortKey="Wong, Samson S Y" sort="Wong, Samson S Y" uniqKey="Wong S" first="Samson S. Y." last="Wong">Samson S. Y. Wong</name>
<affiliation><nlm:aff id="N0x9b35768.0x9ac1b40">Department of Microbiology,</nlm:aff>
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<author><name sortKey="Chan, Kwok Hung" sort="Chan, Kwok Hung" uniqKey="Chan K" first="Kwok-Hung" last="Chan">Kwok-Hung Chan</name>
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<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Amino Acid Sequence</term>
<term>Animals</term>
<term>Base Sequence</term>
<term>Chiroptera (virology)</term>
<term>Genome, Viral</term>
<term>Hong Kong</term>
<term>Molecular Sequence Data</term>
<term>Phylogeny</term>
<term>SARS Virus (classification)</term>
<term>SARS Virus (genetics)</term>
<term>SARS Virus (isolation & purification)</term>
<term>Sequence Analysis, DNA</term>
<term>Viral Proteins (blood)</term>
<term>Viral Proteins (genetics)</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr"><term>Analyse de séquence d'ADN</term>
<term>Animaux</term>
<term>Chiroptera (virologie)</term>
<term>Données de séquences moléculaires</term>
<term>Génome viral</term>
<term>Hong Kong</term>
<term>Phylogénie</term>
<term>Protéines virales (génétique)</term>
<term>Protéines virales (sang)</term>
<term>Séquence d'acides aminés</term>
<term>Séquence nucléotidique</term>
<term>Virus du SRAS ()</term>
<term>Virus du SRAS (génétique)</term>
<term>Virus du SRAS (isolement et purification)</term>
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</keywords>
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</keywords>
<keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>SARS Virus</term>
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<keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>SARS Virus</term>
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</keywords>
<keywords scheme="MESH" xml:lang="en"><term>Amino Acid Sequence</term>
<term>Animals</term>
<term>Base Sequence</term>
<term>Genome, Viral</term>
<term>Molecular Sequence Data</term>
<term>Phylogeny</term>
<term>Sequence Analysis, DNA</term>
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<keywords scheme="MESH" xml:lang="fr"><term>Analyse de séquence d'ADN</term>
<term>Animaux</term>
<term>Données de séquences moléculaires</term>
<term>Génome viral</term>
<term>Hong Kong</term>
<term>Phylogénie</term>
<term>Séquence d'acides aminés</term>
<term>Séquence nucléotidique</term>
<term>Virus du SRAS</term>
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<front><div type="abstract" xml:lang="en"><p>Although the finding of severe acute respiratory syndrome coronavirus (SARS-CoV) in caged palm civets from live animal markets in China has provided evidence for interspecies transmission in the genesis of the SARS epidemic, subsequent studies suggested that the civet may have served only as an amplification host for SARS-CoV. In a surveillance study for CoV in noncaged animals from the wild areas of the Hong Kong Special Administration Region, we identified a CoV closely related to SARS-CoV (bat-SARS-CoV) from 23 (39%) of 59 anal swabs of wild Chinese horseshoe bats (<italic>Rhinolophus sinicus</italic>
) by using RT-PCR. Sequencing and analysis of three bat-SARS-CoV genomes from samples collected at different dates showed that bat-SARS-CoV is closely related to SARS-CoV from humans and civets. Phylogenetic analysis showed that bat-SARS-CoV formed a distinct cluster with SARS-CoV as group 2b CoV, distantly related to known group 2 CoV. Most differences between the bat-SARS-CoV and SARS-CoV genomes were observed in the spike genes, ORF 3 and ORF 8, which are the regions where most variations also were observed between human and civet SARS-CoV genomes. In addition, the presence of a 29-bp insertion in ORF 8 of bat-SARS-CoV genome, not in most human SARS-CoV genomes, suggests that it has a common ancestor with civet SARS-CoV. Antibody against recombinant bat-SARS-CoV nucleocapsid protein was detected in 84% of Chinese horseshoe bats by using an enzyme immunoassay. Neutralizing antibody to human SARS-CoV also was detected in bats with lower viral loads. Precautions should be exercised in the handling of these animals.</p>
</div>
</front>
</TEI>
<affiliations><list><country><li>République populaire de Chine</li>
</country>
</list>
<tree><noCountry><name sortKey="Chan, Kwok Hung" sort="Chan, Kwok Hung" uniqKey="Chan K" first="Kwok-Hung" last="Chan">Kwok-Hung Chan</name>
<name sortKey="Huang, Yi" sort="Huang, Yi" uniqKey="Huang Y" first="Yi" last="Huang">Yi Huang</name>
<name sortKey="Lau, Susanna K P" sort="Lau, Susanna K P" uniqKey="Lau S" first="Susanna K. P." last="Lau">Susanna K. P. Lau</name>
<name sortKey="Li, Kenneth S M" sort="Li, Kenneth S M" uniqKey="Li K" first="Kenneth S. M." last="Li">Kenneth S. M. Li</name>
<name sortKey="Tsoi, Hoi Wah" sort="Tsoi, Hoi Wah" uniqKey="Tsoi H" first="Hoi-Wah" last="Tsoi">Hoi-Wah Tsoi</name>
<name sortKey="Wong, Beatrice H L" sort="Wong, Beatrice H L" uniqKey="Wong B" first="Beatrice H. L." last="Wong">Beatrice H. L. Wong</name>
<name sortKey="Wong, Samson S Y" sort="Wong, Samson S Y" uniqKey="Wong S" first="Samson S. Y." last="Wong">Samson S. Y. Wong</name>
<name sortKey="Woo, Patrick C Y" sort="Woo, Patrick C Y" uniqKey="Woo P" first="Patrick C. Y." last="Woo">Patrick C. Y. Woo</name>
<name sortKey="Yuen, Kwok Yung" sort="Yuen, Kwok Yung" uniqKey="Yuen K" first="Kwok-Yung" last="Yuen">Kwok-Yung Yuen</name>
</noCountry>
<country name="République populaire de Chine"><noRegion><name sortKey="Leung, Suet Yi" sort="Leung, Suet Yi" uniqKey="Leung S" first="Suet-Yi" last="Leung">Suet-Yi Leung</name>
</noRegion>
</country>
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Severe acute respiratory syndrome coronavirus-like virus in Chinese horseshoe bats

Severe acute respiratory syndrome coronavirus-like virus in Chinese horseshoe bats

Source :

Descripteurs français

English descriptors

Abstract

Links toward previous steps (curation, corpus...)

Le document en format XML

Pour manipuler ce document sous Unix (Dilib)

Pour mettre un lien sur cette page dans le réseau Wicri

Pour générer des pages wiki

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